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Book Cover
E-book

Title Yersinia pestis protocols / edited by Ruifu Yang
Published Singapore : Springer, [2018]
©2018

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Description 1 online resource (xi, 290 pages) : illustrations (some color)
Series Springer protocols handbooks, 1949-2448
Springer protocols (Series) 1949-2448
Contents Isolation and identification of Yersinia pestis / Zhizhen Qi, Qingwen Zhang, Yong Jin, Youquan Xin, Haihong Zhao, Xiaoyan Yang, Xiaoqing Xu, and Xuefei Zhang -- Isolation and characterization of Yersinia pestis bacteriophages / Xiangna Zhao -- Extraction of chromosomal DNA and plasmid from Yersinia pestis / Yazhou Zhou -- Extraction of total RNA from Yersinia pestis / Haili Wang and Yanping Han -- Genotyping of Yersinia pestis / Yanjun Li and Yujun Cui -- Genome-wide variation analysis of Yersinia pestis / Chao Yang and Yujun Cui -- Genome-wide detection of expressed sRNAs in Yersinia pestis with RNA-seq / Yanping Han -- Validation of Yersinia pestis sRNAs with nonradioactive-labeled northern blotting / Yanping Han -- Determination of transcription start sites (TSSs) in Yersinia pestis with a primer extension assay / Yanping Han -- Purification of Hfq-associated RNAs with RNA immunoprecipitation (RIP) / Yanping Han -- Overexpression of target sRNAs in tightly controlled multicopy plasmids / Xiaofang Gao, Zizhong Liu, and Yanping Han -- Target validation of sRNA with a GFP reporter gene fusion system / Xiaofang Gao, Zizhong Liu, and Yanping Han -- Inducible gene expression in Yersinia pestis / Juping Zhao and Yicheng Sun -- Analysis of yops secretion by Yersinia pestis type III secretion system / Zongmin Du and Shiyang Cao -- Co-immunoprecipitation analysis for the detection of protein-protein interactions in Yersinia pestis / Shiyang Cao and Zongmin Du -- Detection of type III secretion system needle assembly in Yersinia pestis by cross-linking YscF / Shiyang Cao and Zongmin Du -- Evaluation of protein translocation into eukaryotic cells by Yersinia pestis / Yafang Tan -- Adhesion analysis of Yersinia pestis to host cells / Yafang Tan -- Construction of gene deletion mutants in Yersinia pestis / Wenliang Li, Dan Rong, and Yanping Han -- CRISPR-Cas12a-assisted recombineering in Yersinia pestis / Juping Zhao and Yicheng Sun -- Plasmid curing in Yersinia pestis / Yazhou Zhou -- Genetic regulation analysis of Yersinia pestis / Yiquan Zhang -- Investigation of biofilm formation in Yersinia pestis / Haihong Fang -- Extraction and purification of F1 capsule antigen from Y. pestis / Xiaoyi Wang -- Screening of regulator responses to Yersinia pestis infection with a concatenated tandem array of transcription factor response element (catTFRE) pulldown / Chune Jing -- Animal models for Yersinia pestis / Yujing Bi and Xiaoyi Wang -- Antibiotic resistance evaluation of Yersinia pestis / Jingyu Guo -- PCR for detection and identification of Yersinia pestis / Yong Zhao -- Immunological methods for detection and identification of Yersinia pestis / Yong Zhao -- Analysis of fatty acids in Yersinia pestis by gas chromatography / Yafang Tan -- Evaluation of efficacy of Yersinia pestis vaccines / Xiaoyi Wang -- Online resources for Yersinia pestis / Yanfeng Yan -- Effects of Y. pestis on macrophages / Yujing Bi
Summary This protocol book includes common and advanced research protocols for Yersinia pestis research and for its identification, genotyping and source-tracing. This book includes protocols for genomic and transcriptomic analysis, small RNA study, protein-protein interaction, gene deletion. It will be helpful for researchers in this field, graduate students, clinicians, and researchers in infectious diseases, systems biology, and evolution etc
Bibliography Includes bibliographical references
Notes Online resource; title from PDF title page (SpringerProtocols, viewed June 5, 2018)
Subject Yersinia pestis -- Laboratory manuals
Yersinia pestis -- isolation & purification
Yersinia pestis -- genetics
Microbiology (non-medical)
Science -- Life Sciences -- Biology -- Microbiology.
Yersinia pestis
Genre/Form Laboratory manuals
Laboratory manuals.
Manuels de laboratoire.
Form Electronic book
Author Yang, Rui-fu
ISBN 9789811079474
9811079471