| Description |
xii, 258 pages : illustrations (some color) ; 24 cm |
| Series |
Methods in molecular biology ; v. 224 |
|
Methods in molecular biology (Clifton, N.J.) ; v. 224
|
| Contents |
Machine derived contents note: Preface v -- Contributors xi -- -- 1 Fabrication of cDNA Microarrays -- Charlie C. Xiang and Michael J. Brownstein 1 -- 2 Nylon cDNA Expression Arrays -- George Jokhadze, Stephen Chen, Claire Granger, -- and Alex Chenchik 9 -- 3 Plastic Microarrays: A Novel Array Support Combining -- the Benefits of Macro- and Microarrays -- Alexander Munishkin, Konrad Faulstich, -- Vissarion Aivazachvili, Claire Granger, and Alex Chenchik 31 -- 4 Preparing Fluorescent Probes for Microarray Studies -- Charlie C. Xiang and Michael J. Brownstein 55 -- 5 Escherichia coli Spotted Double-Strand DNA Microarrays: -- RNA Extraction, Labeling, Hybridization, Quality Control, -- and Data Management -- Arkady B. Khodursky, Jonathan A. Bernstein, Brian J. Peter, -- Virgil Rhodius, Volker F. Wendisch, and Daniel P. Zimmer 61 -- 6 Isolation of Polysomal RNA for Microarray Analysis -- YoavArava 79 -- 7 Parallel Analysis of Gene Copy Number and Expression Using -- cDNA Microarrays -- Jonathan R. Pollack 89 -- 8 Genome-wide Mapping of Protein-DNA Interactions by Chromatin -- Immunoprecipitation and DNA Microarray Hybridization -- Jason D. Lieb 99 -- 9 Statistical Issues in cDNA Microarray Data Analysis -- Gordon K. Smyth, Yee Hwa Yang, and Terry Speed 111 -- 10 Experimental Design to Make the Most of Microarray Studies -- M. Kathleen Kerr 137 -- -- -- -- 11 Statistical Methods for Identifying Differentially Expressed -- Genes in DNA Microarrays -- John D. Storey and Robert Tibshirani 149 -- 12 Detecting Stable Clusters Using Principal Component Analysis -- Asa Ben-Hur and Isabelle Guyon 159 -- 13 Clustering in Life Sciences -- Ying Zhao and George Karypis 183 -- 14 A Primer on the Visualization of Microarray Data -- Paul Fawcett 219 -- 15 Microarray Databases: Storage and Retrieval of Microarray Data -- Gavin Sherlock and Catherine A. Ball 235 -- Index 249 |
| Bibliography |
Includes bibliographical references and index |
| Notes |
Also available online via the World Wide Web, by subscription to BioMedProtocols.com (BMP) via Humana Press |
| Subject |
DNA microarrays -- Laboratory manuals.
|
|
Genomics -- Laboratory manuals.
|
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Proteomics -- Laboratory manuals.
|
| Genre/Form |
Laboratory manuals.
|
| Author |
Brownstein, Michael J.
|
|
Khodursky, Arkady B.
|
|
Humana Press.
|
| LC no. |
2003040707 |
| ISBN |
1588292916 : |
|
