Description |
1 online resource : illustrations |
Series |
Springer theses, 2190-5053 |
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Springer theses.
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Contents |
Introduction -- A Novel DNA Model -- Methods -- Finite Size Effects -- Stuctural and Mechanical Properties of Model DNA -- Thermodynamic Properties of Model DNA -- Modelling DNA Tweezers -- Modelling a DNA Walker -- Conclusions |
Summary |
This thesis presents a novel coarse-grained model of DNA, in which bases are represented as rigid nucleotides. The model is shown to quantitatively reproduce many phenomena, including elastic properties of the double-stranded state, hairpin formation in single strands and hybridization of pairs of strands to form duplexes, the first time such a wide range of properties has been captured by a coarse-grained model. The scope and potential of the model is demonstrated by simulating DNA tweezers, an iconic nanodevice, and a two-footed DNA walker - the first time that coarse-grained modelling has been applied to dynamic DNA nanotechnology |
Analysis |
Nanotechnology |
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Physics |
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Biophysics and Biological Physics |
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Statistical Physics, Dynamical Systems and Complexity |
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Soft and Granular Matter, Complex Fluids and Microfluidics |
Notes |
Ph. D. University of Oxford |
Bibliography |
Includes bibliographical references |
Subject |
DNA -- Computer simulation.
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Nanotechnology.
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Genre/Form |
Academic theses.
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Form |
Electronic book
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LC no. |
2012942795 |
ISBN |
9783642305177 (electronic bk.) |
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3642305172 (electronic bk.) |
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3642305164 (print) |
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9783642305160 (print) |
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