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Book Cover
Book
Author Frenkel, Daan, 1948- author.

Title Understanding molecular simulation : from algorithms to applications / Daan Frenkel, Berend Smit
Edition 2nd edition
Published San Diego : Academic Press, [2002]
©2002

Copies

Location Call no. Vol. Availability
 MELB  539.60113 Fre/Uma 2002  AVAILABLE
Description xxii, 638 pages : illustrations ; 24 cm
Series Computational science (San Diego, Calif.)
Contents Statistical mechanics -- Monte Carlo simulations -- Molecular dynamics simulations -- Monte Carlo simulations in various ensembles -- Molecular dynamics in various ensembles -- Free energy calculations -- The Gibbs ensemble -- Other methods to study coexistence -- Free energies of solids -- Free energy of chain molecules -- Long-range interactions -- Biased Monte Carlo schemes -- Accelerating Monte Carlo sampling -- Tackling time-scale problems -- Rare events -- Dissipative particle dynamics
Summary Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practical use in the case studies used in the text. -- Since the first edition only five years ago, the simulation world has changed significantly -- current techniques have matured and new ones have appeared. This new edition deals with these new developments; in particular, there are sections on: Transition path sampling and diffusive barrier crossing to simulaterare events -- Dissipative particle dynamic as a course-grained simulation technique -- Novel schemes to compute the long-ranged forces -- Hamiltonian and non-Hamiltonian dynamics in the context constant-temperature and constant-pressure molecular dynamics simulations -- Multiple-time step algorithms as an alternative for constraints -- Defects in solids -- The pruned-enriched Rosenbluth sampling, recoil-growth, and concerted rotations for complex molecules -- Parallel tempering for glassy Hamiltonians. Examples are included that highlight current applications and the codes of case studies are available on the World Wide Web. Several new examples have been added since the first edition to illustrate recent applications. Questions are included in this new edition. No prior knowledge of computer simulation is assumed.
Providing a unified presentation of computational tools used to study molecular systems, this book explains the physics behind the recipes of molecular simulation for materials science
Bibliography Includes bibliographical references (pages 589-617) and index
Notes Current Copyright Fee: GBP20.00 0. Uk
Subject Intermolecular forces -- Computer simulation
Molecules -- Mathematical models
Intermolecular forces -- Computer simulation.
Molecules -- Mathematical models.
Computersimulation
Molekül
Statistische Physik
Zwischenmolekulare Kraft
Simulatiemodellen.
Monte Carlo-methode.
Statistische mechanica.
Moleculaire dynamica.
Vrije energie.
Fase-evenwichten.
Forças intermoleculares (simulação computacional)
Molécula (modelos matemáticos)
Simulação (estatística)
Algorismes.
Molècules -- Models -- Informàtica.
Simulació per ordinador.
Fisicoquímica.
Montecarlo, Mètode de.
INTERMOLECULAR FORCES.
COMPUTERIZED SIMULATION.
DIGITAL COMPUTERS.
COMPUTER PROGRAMS.
MOLECULES.
MATHEMATICAL MODELS.
Zwischenmolekulare Kraft.
Molekül.
Computersimulation.
Author Smit, Berend, 1962- author.
LC no. 2001091477
ISBN 9780122673511
0122673514