| Description |
1 online resource (xix, 423 pages) : illustrations (some color) |
| Series |
Methods in molecular biology, 1940-6029 ; volume 1945 |
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Methods in molecular biology (Clifton, N.J.) ; v. 1945. 1064-3745
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| Summary |
This volume covers a variety of topics related to the practice of rule-based modeling, a type of mathematical modeling useful for studying biomolecular site dynamics. There is an emphasis on software tools and detailed descriptions of techniques. The chapters in this book discuss topics such as software tools and frameworks for compartmental modeling (Pycellerator, RuleBuilder, Prgy, rxncon, MSMB, and ML-Rules); tools for spatial modeling (Simmune, Smoldyn, MCell-R, SRSim, and CellOrganizer); rule-based models to analyze proteomic data; model annotation; Markov chain aggregation; BioJazz; and methods to identify model parameters (Data2Dynamics, RKappa, and BioNetFit). Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary resources, step-by-step, readily reproducible protocols, and tips on troubleshooting and avoiding known pitfalls |
| Bibliography |
Includes bibliographical references and index |
| Notes |
Online resource; title from PDF title page (SpringerLink, viewed April 10, 2019) |
| Subject |
Molecular biology -- Mathematical models -- Laboratory manuals
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Systems biology -- Mathematical models -- Laboratory manuals
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Systems biology.
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Mathematical models.
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Systems Biology
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Models, Theoretical
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mathematical models.
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Systems biology
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Mathematical models
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Molecular biology -- Mathematical models
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| Genre/Form |
Laboratory manuals
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Laboratory manuals.
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Manuels de laboratoire.
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| Form |
Electronic book
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| Author |
Hlavacek, William S., editor
|
| ISBN |
9781493991020 |
|
1493991027 |
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