Advances in bioinformatics and computational biology : 4th Brazilian Symposium on Bioinformatics, BSB 2009, Porto Alegre, Brazil, July 29-31, 2009 ; proceedings / Katia S. Guimarã̃es, Anna Panchenko, Teresa M. Przytycka (eds.)
Advances in Bioinformatics and Computational Biology; Preface; Organization; Table of Contents; Algorithmic Approaches for Molecular Biology Problems; Micro-array Analysis; Machine Learning Methods for Classification; In Silico Simulation; Short Papers; Genotype Tagging with Limited Overfitting; Constraint Programming Models for Transposition Distance Problem; Comparison of Spectra in Unsequenced Species; BiHEA: A Hybrid Evolutionary Approach for Microarray Biclustering; Using Supervised Complexity Measures in the Analysis of Cancer Gene Expression Data Sets
Quantitative Improvements in cDNA Microarray Spot SegmentationSOM-PORTRAIT: Identifying Non-coding RNAs Using Self-Organizing Maps; Automatic Classification of Enzyme Family in Protein Annotation; Representations for Evolutionary Algorithms Applied to Protein Structure Prediction Problem Using HP Model; Comparing Methods for Multilabel Classification of Proteins Using Machine Learning Techniques; Comparative Study of Classification Algorithms Using Molecular Descriptors in Toxicological DataBases; Influence of Antigenic Mutations in Time Evolution of the Immune Memory -- A Dynamic Modeling
FReDD: Supporting Mining Strategies through a Flexible-Receptor Docking DatabaseA Wide Antimicrobial Peptides Search Method Using Fuzzy Modeling; Identification of Proteins from Tuberculin Purified Protein Derivative (PPD) with Potential for TB Diagnosis Using Bioinformatics Analysis; Mapping HIV-1 Subtype C gp120 Epitopes Using a Bioinformatic Approach; MHC: Peptide Analysis: Implications on the Immunogenicity of Hantaviruses' N protein; An Ontology to Integrate Transcriptomics and Interatomics Data Involved in Gene Pathways of Genome Stability; Author Index
Summary
This book constitutes the refereed proceedings of the4th Brazilian Symposium on Bioinformatics, BSB 2009, held in Porto Alegre, Brazil, in July 2009 The 12 revised full papers and6 extended abstracts were carefully reviewed and selected from55 submissions. The papers areorganized in topical sections on algorithmic approaches for molecular biology problems; micro-array analysis; machine learning methods for classification; and in silico simulation